I'm 99% sure that what you are seeing is 100% normal. The swing-arm on the R3 isn't symmetrical. You can even see it in your picture. The right side of the swing-arm is slightly "humped" closer to the frame. The leading/front section of the swing-arm is higher on the right than the left side is. It's manufactured that way to give the exhaust system a little more clearance, keeping it higher off the ground. If you moved the stands down by where the axle sits, I'm 99% certain the bike would be "level", and look normal. The only reason I'm not 100% certain, as I don't know how bad your crash was, and I can't actually see the bike in person-
"W.O.T. until you see God- THEN brake"